ADASTRA v1.6.10
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rs536601
chr1:229027891
C
>
T
Sequence
atactaatgaaagggcatcgcggg[C/T]cttccctgatgcgaggggaggaag
ASB in cell types
HUES64 (embryonic stem cells)
liver
ASB for transcription factors
OTX2_HUMAN
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View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
OTX2_HUMAN
1.41
-0.32
0.03
1.00
1.78
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
lp-pla2 activity
,
obesity with early age of onset (age >2)
,
total cholesterol
GTEx eQTL
Nerve_Tibial
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)