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rs536601 chr1:229027891 C>T

Sequence
atactaatgaaagggcatcgcggg[C/T]cttccctgatgcgaggggaggaag
ASB in cell types
HUES64 (embryonic stem cells) liver
ASB for transcription factors
OTX2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
OTX2_HUMAN 1.41 -0.32 0.031.00 1.78 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP lp-pla2 activity obesity with early age of onset (age >2) total cholesterol
GTEx eQTL Nerve_Tibial Whole_Blood

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