rs536906 chr1:160844969 C>T
- Sequence
ctagcctgcatgacagagcaagac[C/T]taatctcaaaaaacaataaaaaat
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ARI1B_HUMAN ATF4_HUMAN ATF3_HUMAN MTG16_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ARI1B_HUMAN | 3.37 | n/a | 2.00 | n/a | n/a | |||
| ATF4_HUMAN | 2.81 | n/a | 2.00 | n/a | No Hit | |||
| ATF3_HUMAN | 2.32 | -2.91 | 2.00 | n/a | No Hit | |||
| MTG16_HUMAN | 2.58 | n/a | 2.00 | n/a | n/a | |||
| MTG8R_HUMAN | 2.00 | n/a | 2.00 | n/a | n/a |
Items per page:
1 – 5 of 6
Motif analysis
Genetic associations
GTEx eQTL Artery_Coronary, Artery_Tibial, Cells_EBV-transformed_lymphocytes, Colon_Transverse, Heart_Left_Ventricle, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Whole_Blood