rs538645 chr11:118840360 C>T
- Sequence
attcaaataatctaacattgagct[C/T]tcctaacactatacagaatcccag
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- Z518A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| Z518A_HUMAN | 1.70 | -1.42 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), height, infant head circumference, maternal transmission distortion, rheumatoid arthritis, stabilized warfarin dose, total cholesterol