rs539510 chr3:197001835 T>C
- Sequence
tcattagcactgacacagcagggg[T/C]cccctgctgccacctgacaatcca
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- MTA2_HUMAN IKZF2_HUMAN IKZF1_HUMAN TADBP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTA2_HUMAN | n/a | 3.42 | 1.33 | n/a | n/a | |||
| IKZF2_HUMAN | -2.94 | 2.55 | 1.33 | n/a | n/a | |||
| IKZF1_HUMAN | -2.13 | 2.05 | 1.33 | n/a | No Hit | |||
| TADBP_HUMAN | n/a | 2.31 | 1.33 | n/a | n/a | |||
| BACH1_HUMAN | n/a | 2.12 | 1.33 | n/a | No Hit |
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