rs5402 chr3:171009950 T>A
- Sequence
tgtgtgtgtgtgtgtgtgtgtgtg[T/A]gacttaccacaatatagtcctgat
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- IKZF1_HUMAN IKZF2_HUMAN ATF7_HUMAN MEF2B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.73 | -3.25 | 1.33 | n/a | No Hit | |||
| IKZF2_HUMAN | 2.39 | -2.49 | 1.33 | n/a | n/a | |||
| ATF7_HUMAN | 2.18 | -2.49 | 1.33 | n/a | n/a | |||
| MEF2B_HUMAN | 2.05 | n/a | 1.33 | n/a | No Hit | |||
| TBX21_HUMAN | 1.70 | n/a | 1.33 | 3.99 | Discordant |
Items per page:
1 – 5 of 5
Motif analysis
