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rs541978 chr1:31945136 T>G

Sequence
tataaaatataaaatgggctgggc[T/G]cggtggcttacgcctgtaatccca
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN -0.64 1.19 1.000.04 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_EBV-transformed_lymphocytes Esophagus_Muscularis Whole_Blood

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