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rs542305 chr9:131383392 A>G

Sequence
ctggaggcctcacattcctggatc[A/G]gatcatattacaagttagctgtgg
ASB in cell types
HepG2 (hepatoblastoma) keratinocytes
ASB for transcription factors
SNAI2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SNAI2_HUMAN 0.23 1.28 1.000.02 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease hypertension (early onset hypertension) schizophrenia
GTEx eQTL Artery_Tibial Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Cortex Brain_Hypothalamus Esophagus_Gastroesophageal_Junction Esophagus_Muscularis Muscle_Skeletal Nerve_Tibial Thyroid

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