rs544039 chr2:21176113 C>A
- Sequence
ctgaaatgcattttttttactcct[C/A]atttgtatatttctagcaacttta
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.32 | 0.75 | 1.31 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP coronary artery disease (cad), diastolic blood pressure (dbp), hdl cholesterol, ldl cholesterol, ldl cholesterol change with statins, parkinsons disease, total cholesterol, triglycerides
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg