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rs544941 chr1:111769712 A>T

Sequence
gtttccagttatttctacccgaag[A/T]ttatttggtctgtgggtctgcagt
ASB in cell types
neutrophils CD34+ hematopoietic stem cells

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
neutrophils 1.92 -0.39 9.8·10-31.00 1.67
CD34+ hematopoietic stem cells 1.88 -1.59 0.031.00 2.00
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol suicide attempts in bipolar disorder (substance abuse/dependence) triglycerides
GTEx eQTL Adipose_Subcutaneous Artery_Tibial Esophagus_Gastroesophageal_Junction Muscle_Skeletal Nerve_Tibial Thyroid Whole_Blood

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