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rs546096 chr1:27045952 G>A

Sequence
aggctttgatatattttcttggcc[G/A]actcctggaaggatcaggatgaat
ASB in cell types
MCF10A (breast epithelial cells)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.44 1.04 1.009.9·10-5 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP arthritis including non-rheumatoid
GTEx eQTL Adipose_Subcutaneous Brain_Cortex Cells_Cultured_fibroblasts Esophagus_Mucosa Esophagus_Muscularis Nerve_Tibial

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