rs546204 chr8:101438671 G>A
- Sequence
ccgggagcgaaacttcctcgaggc[G/A]ctggggtggggaggctgtaggctg
- ASB in cell types
- VCaP (prostate carcinoma) SK-BR-3 (breast adenocarcinoma) LHSAR (prostate epithelial cells) LNCaP (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN AP2C_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.03 | 1.19 | 1.59 | n/a | No Hit | |||
| AP2C_HUMAN | 2.67 | 0.00 | 1.67 | 1.00 | Weak Discordant |
Items per page:
1 – 2 of 2
Motif analysis
