rs546481 chr1:234724136 G>A
- Sequence
agagagagagagagagaaatggag[G/A]gagagggagggaggaagggaggag
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) MCF7 (Invasive ductal breast carcinoma) HEK293T (embryonic kidney)
- ASB for transcription factors
- ZN444_HUMAN MAFG_HUMAN EGR1_HUMAN ZN148_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN444_HUMAN | 1.21 | n/a | 2.00 | n/a | n/a | |||
| MAFG_HUMAN | n/a | 2.82 | 2.50 | n/a | No Hit | |||
| EGR1_HUMAN | -2.11 | 0.45 | 2.67 | -0.76 | Weak Discordant | |||
| ZN148_HUMAN | -2.80 | 2.97 | 2.75 | n/a | n/a | |||
| NCOR1_HUMAN | n/a | 0.44 | 2.67 | n/a | n/a |
Items per page:
1 – 5 of 17
Motif analysis
