rs546613 chr2:173571417 T>C
- Sequence
gatgagacaaataccggctgaagc[T/C]ggctgataaatatttcctgtagga
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- RAD21_HUMAN SMC3_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | -0.13 | 1.45 | 1.88 | n/a | n/a | |||
| SMC3_HUMAN | -0.30 | 1.20 | 2.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.10 | 0.79 | 1.70 | n/a | No Hit |
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