rs546944 chr6:53469499 A>G
- Sequence
ttttactgtgttgtggtatgttcc[A/G]tgaacacccagttttttagtgatt
- ASB in cell types
- T47D (invasive ductal carcinoma) VCaP (prostate carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| T47D (invasive ductal carcinoma) | -0.70 | 1.07 | 2.00 | |||
| VCaP (prostate carcinoma) | 0.80 | -0.20 | 2.05 |
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