rs548928 chr7:54597000 G>A
- Sequence
gttcctcatctgtaaaatgaggat[G/A]ttagaattcttcatctagaatcat
- ASB in cell types
- GM12878 (female B-cells) GM12891 (male B-cells)
- ASB for transcription factors
- SPI1_HUMAN MTA2_HUMAN IKZF2_HUMAN TBX21_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.97 | -1.56 | 1.42 | -2.50 | Concordant | |||
| MTA2_HUMAN | 1.87 | -2.13 | 1.33 | n/a | n/a | |||
| IKZF2_HUMAN | 1.30 | -0.79 | 1.33 | n/a | n/a | |||
| TBX21_HUMAN | 1.73 | -1.35 | 1.33 | n/a | No Hit |
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Motif analysis
Genetic associations
GRASP diastolic blood pressure (dbp), ldl cholesterol change with statins, systolic blood pressure (sbp), urinary albumin-to-creatinine ratio