rs549472 chr18:58212546 C>T
- Sequence
tgcatctgtgattcagttacctcc[C/T]accgggtccctcccgtgacacgtg
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- MTA2_HUMAN P66B_HUMAN IKZF1_HUMAN ATF7_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTA2_HUMAN | 2.04 | -2.29 | 1.33 | n/a | n/a | |||
| P66B_HUMAN | 2.30 | -2.34 | 1.33 | n/a | n/a | |||
| IKZF1_HUMAN | 1.18 | -0.94 | 1.33 | -3.13 | Concordant | |||
| ATF7_HUMAN | 1.79 | -1.47 | 1.33 | n/a | n/a |
Items per page:
1 – 4 of 4
Motif analysis
