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rs550451 chr18:58212447 A>G

Sequence
ggtggcaggcaacagagtgtatgc[A/G]ggggaactcccctttataaccatc
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
TADBP_HUMAN COE1_HUMAN TBX21_HUMAN BACH1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TADBP_HUMAN 2.51 -2.76 1.9·10-31.00 1.33 n/a n/a
COE1_HUMAN 2.07 -1.76 2.3·10-31.00 1.33 n/a No Hit
TBX21_HUMAN 1.93 -2.17 8.9·10-31.00 1.33 n/a No Hit
BACH1_HUMAN 1.97 -2.21 0.011.00 1.33 n/a No Hit
SKIL_HUMAN 1.66 -1.48 0.021.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Muscularis Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis

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