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rs551988 chr20:58313585 T>C

Sequence
cacttccgcaactgctgctcactc[T/C]tcagccctccgtcatctcagctcc
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 (Invasive ductal breast carcinoma) -0.72 0.86 1.003.0·10-5 3.81
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol waist hip ratio
GTEx eQTL Cells_Cultured_fibroblasts Muscle_Skeletal Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis

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