rs552536614 chr11:18526681 T>G
- Sequence
ctgcaccggggcttccggcccgtc[T/G]gggaagcttgcttggctgggccgg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- GABP1_HUMAN MNT_HUMAN RFX1_HUMAN ZN282_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GABP1_HUMAN | n/a | 0.69 | 2.00 | n/a | n/a | |||
| MNT_HUMAN | -3.00 | 2.29 | 2.00 | n/a | n/a | |||
| RFX1_HUMAN | n/a | 2.85 | 2.00 | n/a | No Hit | |||
| ZN282_HUMAN | n/a | 0.94 | 2.00 | n/a | n/a | |||
| ETV1_HUMAN | n/a | 2.71 | 2.00 | n/a | No Hit |
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Motif analysis
