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rs553214 chr9:133129513 C>T

Sequence
accaggccatgggccagccgagga[C/T]gagtggagaggctgccccaagcta
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 (Invasive ductal breast carcinoma) 0.72 -0.16 0.041.00 1.73
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration hdl cholesterol ldl cholesterol microalbuminuria urinary albumin-to-creatinine ratio
GTEx eQTL Brain_Putamen_basal_ganglia Colon_Transverse Esophagus_Muscularis Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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