rs553739 chr13:31476900 C>T
- Sequence
tctttaaatttgttttttctgcca[C/T]tgaacatctgtttgtgactttttt
- ASB in cell types
- SK-N-SH (neuroblastoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.95 | 0.32 | 1.28 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP birth weight, cystatin c in serum, homa-b, serum creatinine, triglycerides change with statins, years of education