rs554180 chr11:107929059 C>T
- Sequence
ctttcccgcctgaaccggggtcgt[C/T]ctcgccgccccctcttccccaact
- ASB in cell types
- CD14+ monocytes
- ASB for transcription factors
- STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 1.90 | -3.82 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP birth weight, longstanding arthritis, premature ovarian failure, salmonella-induced pyroptosis, total cholesterol change with statins