rs554653 chr6:6547254 C>A
- Sequence
cagcgccatctggtggttatgatc[C/A]gcatgtacccgccaatgcctgcag
- ASB in cell types
- K562 (myelogenous leukemia) foreskin keratinocyte neutrophils hepatocytes
- ASB for transcription factors
- FOXK2_HUMAN ARI1B_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 1.99 | 0.75 | 2.17 | n/a | n/a | |||
| ARI1B_HUMAN | n/a | 2.42 | 3.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.52 | 1.09 | 1.53 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP age at death with kuru exposure, maternal transmission distortion, resistance to kuru in aged women despite likely exposure, sporadic creutzfeldt-jakob disease