rs554796 chr11:124380722 T>C
- Sequence
aagtctctaaacaaagatttccta[T/C]cagaaaagacatatgttagatgga
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- EMSY_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EMSY_HUMAN | 2.39 | -3.65 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Hypothalamus, Colon_Transverse, Heart_Atrial_Appendage, Nerve_Tibial, Pituitary, Testis, Thyroid