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rs555404 chr12:120738181 T>C

Sequence
agagggtgtcaaggcctgagcttc[T/C]gagggaggtggggaggggaccggg
ASB in cell types
SK-N-AS (neuroblastoma)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
SK-N-AS (neuroblastoma) -2.21 2.29 1.005.1·10-3 2.00
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Motif analysis

No data available

Genetic associations

GRASP dsm-iv cannabis dependence
GTEx eQTL Artery_Aorta Artery_Tibial Brain_Anterior_cingulate_cortex_BA24 Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Hippocampus Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Sigmoid Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Lung Muscle_Skeletal Nerve_Tibial Prostate Skin_Sun_Exposed_Lower_leg Spleen Testis Thyroid Whole_Blood

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