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rs555754 chr6:160348391 G>A

Sequence
gtccgcgggtcactccgaggcgcg[G/A]gctgcgggcggcgggcggcgggcg
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
SMAD4_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMAD4_HUMAN n/a 2.11 1.000.01 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI pulse pressure
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Brain_Caudate_basal_ganglia Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Cells_Cultured_fibroblasts Esophagus_Mucosa Heart_Left_Ventricle Liver Lung Nerve_Tibial Ovary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Thyroid

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