rs556107 chr1:234717312 C>T
- Sequence
ggagattactgagtaaacctacaa[C/T]gtcctcatgcttaaggccccgtct
- ASB in cell types
- K562 (myelogenous leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | -0.33 | 0.81 | 2.58 |
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Motif analysis
No data available
Genetic associations
EMBL-EBI ldl cholesterol x physical activity interaction (2df test), low density lipoprotein cholesterol levels, total cholesterol levels