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rs556157869 chr1:940256 C>T

Sequence
gctggccgcgcgggggaggggcgc[C/T]ggccgccggggagcgcgctgtcaa
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
MEIS2_HUMAN VEZF1_HUMAN ZN148_HUMAN CTBP1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MEIS2_HUMAN n/a 3.36 1.006.3·10-13 1.33 n/a No Hit
VEZF1_HUMAN 2.94 n/a 5.3·10-61.00 1.50 n/a No Hit
ZN148_HUMAN 2.16 -2.42 0.011.00 1.33 n/a n/a
CTBP1_HUMAN -1.91 1.97 1.000.03 1.33 n/a n/a
P66B_HUMAN -0.11 1.91 1.000.05 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial Colon_Transverse Skin_Not_Sun_Exposed_Suprapubic Thyroid

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