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rs55638694 chr9:109331625 C>G

Sequence
tggtacaggctggcatctggtagg[C/G]agaaggctgcccatagtacagctg
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
GRHL2_HUMAN CTBP1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GRHL2_HUMAN 0.33 1.57 1.001.2·10-5 1.48 n/a No Hit
CTBP1_HUMAN -1.75 1.55 1.000.04 1.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Whole_Blood

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