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rs55654158 chr13:30396967 C>T

Sequence
tggtaaccaccattctgctgttgt[C/T]tctagacactcatataactagagt
ASB in cell types
GM12878 (female B-cells)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells) 0.17 0.67 0.966.1·10-4 1.32
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Motif analysis

No data available

Genetic associations

GTEx eQTL Brain_Caudate_basal_ganglia

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