rs556637 chr1:201650593 C>T
- Sequence
ggcggggccgagtgacgggcttgg[C/T]gggtggggaacatgcaagagctcg
- ASB in cell types
- K562 (myelogenous leukemia) T47D (invasive ductal carcinoma)
- ASB for transcription factors
- REST_HUMAN PKNX1_HUMAN NRF1_HUMAN CTBP1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REST_HUMAN | n/a | 3.74 | 3.00 | n/a | No Hit | |||
| PKNX1_HUMAN | n/a | 2.09 | 3.00 | n/a | No Hit | |||
| NRF1_HUMAN | n/a | 2.37 | 3.00 | n/a | No Hit | |||
| CTBP1_HUMAN | n/a | 2.19 | 3.00 | n/a | n/a |
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