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rs556960 chr10:8052183 A>G

Sequence
taccggctggctccattacccggg[A/G]catccagccccaggccccccaccc
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
CREB1_HUMAN ZFX_HUMAN CLOCK_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CREB1_HUMAN n/a 2.80 1.005.4·10-5 2.50 n/a No Hit
ZFX_HUMAN -2.09 2.08 1.001.3·10-3 1.50 n/a No Hit
CLOCK_HUMAN -3.00 2.17 1.000.05 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP body mass index (bmi) classical hodgkins lymphoma cystatin c in serum rheumatoid arthritis

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