rs557318 chr19:6088076 G>C
- Sequence
gctgcatgttggtgagtcagagac[G/C]agaacaaagaggaagcaatgaccc
- ASB in cell types
- CD14+ monocytes monocyte-derived macrophages GM12878 (female B-cells)
- ASB for transcription factors
- STAT1_HUMAN TF65_HUMAN FOXK2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 2.73 | n/a | 2.50 | n/a | No Hit | |||
| TF65_HUMAN | 1.55 | n/a | 2.50 | n/a | No Hit | |||
| FOXK2_HUMAN | 1.67 | -1.56 | 1.33 | n/a | n/a |
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