rs55777123 chr15:97082952 G>A
- Sequence
gttttcgcccctctggtgggtcag[G/A]ggtctctctctgaggagtttccct
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- COT1_HUMAN IKZF1_HUMAN IKZF2_HUMAN BHE40_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | n/a | 2.73 | 1.33 | 1.09 | Weak Concordant | |||
| IKZF1_HUMAN | -2.23 | 2.25 | 1.33 | n/a | No Hit | |||
| IKZF2_HUMAN | -0.79 | 1.66 | 1.33 | n/a | n/a | |||
| BHE40_HUMAN | -2.01 | 1.79 | 1.50 | n/a | No Hit |
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Motif analysis
