rs55785723 chr7:105934720 A>G
- Sequence
gagatgggggagctaagcagaggg[A/G]gactggcttggctgcttgaacagt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) VCaP (prostate carcinoma) foreskin keratinocyte HepG2 (hepatoblastoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.90 | 0.57 | 1.44 | n/a | No Hit | |||
| RAD21_HUMAN | 1.42 | -0.10 | 1.39 | n/a | n/a | |||
| FOXA1_HUMAN | 0.92 | -0.01 | 1.62 | n/a | No Hit |
Items per page:
1 – 3 of 3