rs55789308 chr19:54020535 G>A
- Sequence
aaaattcaaacttctaggccaggc[G/A]cggtggctcacccctattatccca
- ASB in cell types
- K562 (myelogenous leukemia) A549 (lung carcinoma) HUVEC (umbilical vein endothelial cells)
- ASB for transcription factors
- JUN_HUMAN IKZF1_HUMAN FLI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 0.84 | 0.26 | 1.42 | n/a | No Hit | |||
| IKZF1_HUMAN | 1.79 | -1.09 | 2.00 | n/a | No Hit | |||
| FLI1_HUMAN | 1.90 | n/a | 2.00 | n/a | No Hit |
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