rs55871205 chr9:7536596 C>T
- Sequence
gtggcagcaggaggctcagcggcc[C/T]aacatacactttatgaggcttgct
- ASB in cell types
- lymphoblastoid cells SK-N-SH (neuroblastoma) H1 (embryonic stem cells) GM19238 (female B-cells)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.07 | 0.44 | 1.37 | n/a | No Hit | |||
| RAD21_HUMAN | 1.74 | 0.19 | 1.30 | n/a | n/a |
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