rs559038 chr6:147165628 C>T
- Sequence
acaggccctgctgatgctcacacc[C/T]cacatggactgggcagatatgcca
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- MTG16_HUMAN TAL1_HUMAN ARI1B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTG16_HUMAN | 1.49 | -1.77 | 1.33 | n/a | n/a | |||
| TAL1_HUMAN | 1.63 | -1.42 | 1.33 | n/a | No Hit | |||
| ARI1B_HUMAN | 1.24 | -1.52 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, microalbuminuria, urinary albumin-to-creatinine ratio