rs55905216 chr2:158497675 G>C
- Sequence
ttctctggctctgtgtactcagtt[G/C]tgaaacagcgataatgtgtaactc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- MTG16_HUMAN MTG8R_HUMAN ATF3_HUMAN SMCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MTG16_HUMAN | 3.07 | n/a | 1.50 | n/a | n/a | |||
| MTG8R_HUMAN | 2.88 | -3.76 | 1.50 | n/a | n/a | |||
| ATF3_HUMAN | 1.42 | -0.63 | 1.33 | n/a | No Hit | |||
| SMCA4_HUMAN | 1.98 | -0.77 | 1.33 | n/a | n/a | |||
| HTF4_HUMAN | 1.93 | -0.46 | 1.33 | n/a | No Hit |
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