rs55909571 chr5:181221732 T>C
- Sequence
tcatgcatgcacgatagcccgcgg[T/C]gctggcctgcaggaattggtccac
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- IKZF1_HUMAN COT1_HUMAN BHE40_HUMAN ARNT_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 2.34 | -1.48 | 1.33 | n/a | No Hit | |||
| COT1_HUMAN | 1.95 | -2.19 | 1.33 | n/a | No Hit | |||
| BHE40_HUMAN | 1.56 | -1.84 | 1.33 | n/a | No Hit | |||
| ARNT_HUMAN | 2.02 | 0.25 | 1.33 | n/a | No Hit |
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