rs55940596 chr19:48563473 T>A
- Sequence
agtggaattctactcagccgcaaa[T/A]gggaacaagctctaatgtatacac
- ASB in cell types
- K562 (myelogenous leukemia) breast tumor tissue
- ASB for transcription factors
- ESR1_HUMAN TAL1_HUMAN MNT_HUMAN MTA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.91 | -3.78 | 2.50 | n/a | No Hit | |||
| TAL1_HUMAN | 1.84 | n/a | 2.00 | n/a | No Hit | |||
| MNT_HUMAN | 1.29 | -0.87 | 2.00 | n/a | n/a | |||
| MTA2_HUMAN | 1.60 | -1.26 | 2.00 | n/a | n/a | |||
| HDAC2_HUMAN | 1.75 | -0.21 | 2.00 | n/a | n/a |
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