rs55980793 chr17:80989204 T>C
- Sequence
tgatcgctctgccgggtctgcagc[T/C]gcagccacagctaagcgctccctc
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- EGR1_HUMAN CTCF_HUMAN ERR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EGR1_HUMAN | -1.48 | 1.70 | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.61 | 0.73 | 1.58 | n/a | No Hit | |||
| ERR1_HUMAN | -1.86 | 2.10 | 2.00 | n/a | No Hit |
Items per page:
1 – 3 of 3