rs560180 chr18:42175131 A>G
- Sequence
gagcccatcactgtctagtacctc[A/G]gacagcaacccaagcagggaagca
- ASB in cell types
- HL-60 (acute myeloid leukemia)
- ASB for transcription factors
- REST_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REST_HUMAN | -1.81 | 1.58 | 1.50 | 3.88 | Concordant |
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Motif analysis
