rs560243 chr6:52334004 T>C
- Sequence
gtcacacattaaaccacaaatgtt[T/C]tgggttccttgacaactagattgt
- ASB in cell types
- K562 (myelogenous leukemia) Th1-cells
- ASB for transcription factors
- TBX21_HUMAN COT1_HUMAN ARI1B_HUMAN HDAC2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBX21_HUMAN | -3.06 | 2.60 | 1.33 | n/a | No Hit | |||
| COT1_HUMAN | -3.26 | 2.35 | 2.00 | n/a | No Hit | |||
| ARI1B_HUMAN | -3.18 | 2.35 | 2.00 | n/a | n/a | |||
| HDAC2_HUMAN | -2.02 | 1.79 | 2.00 | n/a | n/a | |||
| KDM1A_HUMAN | -1.34 | 1.56 | 2.00 | n/a | n/a |
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