ADASTRA v1.6.10
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rs560849
chr19:7534174
T
>
C
Sequence
ggagtgaataatttaaaggggccg[T/C]gcctgcggagccgggcggaacgct
ASB in cell types
HEK293 (embryonic kidney)
keratinocytes
ASB for transcription factors
SNAI2_HUMAN
ZBT26_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SNAI2_HUMAN
-2.80
2.17
1.00
2.0·10
-5
1.33
n/a
No Hit
ZBT26_HUMAN
n/a
2.48
1.00
0.01
2.00
n/a
n/a
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Adrenal_Gland
,
Nerve_Tibial
,
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)