rs561377 chr18:3604830 T>G
- Sequence
tttcaccatttagaaaatgcaaaa[T/G]gttaggtagaaaatgtcagcgtac
- ASB in cell types
- CD14+ monocytes
- ASB for transcription factors
- STAT1_HUMAN ESR1_HUMAN CEBPB_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 0.05 | 3.27 | 1.67 | n/a | No Hit | |||
| ESR1_HUMAN | n/a | 1.90 | 2.50 | n/a | No Hit | |||
| CEBPB_HUMAN | -2.68 | 1.59 | 1.67 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Muscle_Skeletal, Nerve_Tibial, Pituitary, Thyroid, Whole_Blood