rs56150947 chr22:49960271 G>A
- Sequence
cctcgaggccgcgggacaagcgca[G/A]gtcgcctcccgcactcccacaccc
- ASB in cell types
- CD14+ monocytes
- ASB for transcription factors
- STAT1_HUMAN MAX_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | -2.54 | 2.15 | 2.50 | n/a | No Hit | |||
| MAX_HUMAN | 0.31 | 1.17 | 1.21 | n/a | No Hit | |||
| CTCF_HUMAN | 0.53 | 0.44 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Frontal_Cortex_BA9, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Whole_Blood