rs56193624 chr5:19735321 T>C
- Sequence
gtcgcaacataagtgctgctctta[T/C]atctctttgctgaaaagacaatag
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) T47D (invasive ductal carcinoma) ZR-75-1 (invasive ductal carcinoma)
- ASB for transcription factors
- ESR1_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.54 | 0.53 | 2.53 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.27 | 0.87 | 2.21 | n/a | No Hit |
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