rs562187 chr10:77156641 C>T
- Sequence
gcctgaattctgctaacacataag[C/T]gcagttaaatgataaccagccatt
- ASB in cell types
- SK-BR-3 (breast adenocarcinoma) primary endothelial colony-forming cells
- ASB for transcription factors
- ERR1_HUMAN TAL1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ERR1_HUMAN | -0.62 | 1.70 | 2.25 | n/a | No Hit | |||
| TAL1_HUMAN | -1.66 | 1.67 | 1.50 | 1.41 | Weak Concordant |
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Motif analysis
