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rs562231 chr11:79391362 T>C

Sequence
actcacccaatgtttctcagttcc[T/C]tcctcagggcctgatctgtgctag
ASB in cell types
periferal blood macrophages
ASB for transcription factors
SPI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 1.55 n/a 0.041.00 2.00 -1.16 Weak Concordant
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Motif analysis

SPI1_HUMAN Weak Concordant
SPI1_HUMAN pic

Genetic associations

GRASP hdl cholesterol total cholesterol triglycerides
GTEx eQTL Artery_Aorta Cells_Cultured_fibroblasts

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